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emsa probe biotin labeling kit  (Beyotime)


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    Structured Review

    Beyotime emsa probe biotin labeling kit
    MdCDOF3 and MdDOF3.6 bind <t>to</t> <t>MdCKX7</t> promoter and activate its transcription. (A) Yeast one-hybridization (Y1H) assays showed that MdCDOF3 and MdDOF3.6 interacted with MdCKX7 promoter. The 2200 bp upstream MdCKX7 promoter sequence of ATG is used for detection. (B-C) The relative levels of MdCKX7 promoter fragment enriched by MdCDOF3 (B) and MdDOF3.6 (C) detected by chromatin immunoprecipitation (ChIP)-qPCR. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a and b) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (D–E) Electrophoretic shift assay <t>(EMSA)</t> determination of the interaction of MdCDOF3 (D) and MdDOF3.6 (E) with labeled DNA Probes in the MdCKX7 promoter. (F-I) Luciferase assays showed that MdCDOF3 (F and G) and MdDOF3.6 (H and I) activated MdCKX7 expression in Tobacco leaves by transient injection. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b, and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (J-K) GUS staining and activity of apple calli co-expressing different combinations of recombinant plasmids including MdCKX7 pro ::GUS, 35S pro ::MdCDOF3 + MdCKX7 pro ::GUS, and 35S pro ::MdDOF3.6 + MdCKX7 pro ::GUS. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA.
    Emsa Probe Biotin Labeling Kit, supplied by Beyotime, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/emsa+probe+biotin+labeling+kit/emsa+probe+biotin+labeling+kit/pmc12261083-246-10-15
    Average 90 stars, based on 1 article reviews
    emsa probe biotin labeling kit - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Two DNA-binding One Zinc Finger transcription factors, MdCDOF3 and MdDOF3.6, accelerate leaf senescence by activating cytokinin oxidase MdCKX7 in response to sorbitol signaling in apple"

    Article Title: Two DNA-binding One Zinc Finger transcription factors, MdCDOF3 and MdDOF3.6, accelerate leaf senescence by activating cytokinin oxidase MdCKX7 in response to sorbitol signaling in apple

    Journal: Horticulture Research

    doi: 10.1093/hr/uhaf120

    MdCDOF3 and MdDOF3.6 bind to MdCKX7 promoter and activate its transcription. (A) Yeast one-hybridization (Y1H) assays showed that MdCDOF3 and MdDOF3.6 interacted with MdCKX7 promoter. The 2200 bp upstream MdCKX7 promoter sequence of ATG is used for detection. (B-C) The relative levels of MdCKX7 promoter fragment enriched by MdCDOF3 (B) and MdDOF3.6 (C) detected by chromatin immunoprecipitation (ChIP)-qPCR. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a and b) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (D–E) Electrophoretic shift assay (EMSA) determination of the interaction of MdCDOF3 (D) and MdDOF3.6 (E) with labeled DNA Probes in the MdCKX7 promoter. (F-I) Luciferase assays showed that MdCDOF3 (F and G) and MdDOF3.6 (H and I) activated MdCKX7 expression in Tobacco leaves by transient injection. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b, and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (J-K) GUS staining and activity of apple calli co-expressing different combinations of recombinant plasmids including MdCKX7 pro ::GUS, 35S pro ::MdCDOF3 + MdCKX7 pro ::GUS, and 35S pro ::MdDOF3.6 + MdCKX7 pro ::GUS. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA.
    Figure Legend Snippet: MdCDOF3 and MdDOF3.6 bind to MdCKX7 promoter and activate its transcription. (A) Yeast one-hybridization (Y1H) assays showed that MdCDOF3 and MdDOF3.6 interacted with MdCKX7 promoter. The 2200 bp upstream MdCKX7 promoter sequence of ATG is used for detection. (B-C) The relative levels of MdCKX7 promoter fragment enriched by MdCDOF3 (B) and MdDOF3.6 (C) detected by chromatin immunoprecipitation (ChIP)-qPCR. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a and b) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (D–E) Electrophoretic shift assay (EMSA) determination of the interaction of MdCDOF3 (D) and MdDOF3.6 (E) with labeled DNA Probes in the MdCKX7 promoter. (F-I) Luciferase assays showed that MdCDOF3 (F and G) and MdDOF3.6 (H and I) activated MdCKX7 expression in Tobacco leaves by transient injection. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b, and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (J-K) GUS staining and activity of apple calli co-expressing different combinations of recombinant plasmids including MdCKX7 pro ::GUS, 35S pro ::MdCDOF3 + MdCKX7 pro ::GUS, and 35S pro ::MdDOF3.6 + MdCKX7 pro ::GUS. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA.

    Techniques Used: Hybridization, Sequencing, Chromatin Immunoprecipitation, ChIP-qPCR, Shift Assay, Labeling, Luciferase, Expressing, Injection, Staining, Activity Assay, Recombinant

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    Labeling:

    Article Title: Mango MiEIL4 modulates starch degradation during fruit ripening by upregulating the expression of β-amylase and α-amylase genes
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    Article Snippet: .. The oligonucleotide probe containing core GATA elements and the designed mutant probe (mProbe, GATA to AAAA) were synthesised (Sangon Biotech) and labelled with an EMSA Probe Biotin Labeling Kit (Beyotime). .. DNA binding assays were performed using the Chemiluminescent EMSA Kit (Beyotime) following the manufacturer's instructions.

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    Article Title: Two DNA-binding One Zinc Finger transcription factors, MdCDOF3 and MdDOF3.6, accelerate leaf senescence by activating cytokinin oxidase MdCKX7 in response to sorbitol signaling in apple
    Article Snippet: The coding sequences of MdCDOF3 and MdDOF3.6 were cloned into the expression vector pET-30a-c. MdCDOF3-His, MdDOF3.6-His recombinant proteins were expressed in E. coli strain BL21 and the purification of recombinant proteins depended on specific binding of a histidine tag (His-tag) to immobilized metal ions (nickel) (Thermo Scientific, San Jose, CA, USA) [ ]. .. Oligonucleotide probes for the MdCKX7 promoter were labeled using the EMSA Probe Biotin Labeling Kit (Beyotime, Shanghai, China) according to the manufacturer’s instructions. ..

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    Mutagenesis:

    Article Title: GATA8-Mediated Antiviral Defence Is Countered by Tomato Chlorosis Virus-Encoded Pathogenicity Protein p27.
    Article Snippet: .. The oligonucleotide probe containing core GATA elements and the designed mutant probe (mProbe, GATA to AAAA) were synthesised (Sangon Biotech) and labelled with an EMSA Probe Biotin Labeling Kit (Beyotime). .. DNA binding assays were performed using the Chemiluminescent EMSA Kit (Beyotime) following the manufacturer's instructions.

    Electrophoretic Mobility Shift Assay:

    Article Title: TgMYBS1-TgSUS1 regulatory module mediates sucrose metabolism in Torreya grandis kernels.
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    MdCDOF3 and MdDOF3.6 bind <t>to</t> <t>MdCKX7</t> promoter and activate its transcription. (A) Yeast one-hybridization (Y1H) assays showed that MdCDOF3 and MdDOF3.6 interacted with MdCKX7 promoter. The 2200 bp upstream MdCKX7 promoter sequence of ATG is used for detection. (B-C) The relative levels of MdCKX7 promoter fragment enriched by MdCDOF3 (B) and MdDOF3.6 (C) detected by chromatin immunoprecipitation (ChIP)-qPCR. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a and b) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (D–E) Electrophoretic shift assay <t>(EMSA)</t> determination of the interaction of MdCDOF3 (D) and MdDOF3.6 (E) with labeled DNA Probes in the MdCKX7 promoter. (F-I) Luciferase assays showed that MdCDOF3 (F and G) and MdDOF3.6 (H and I) activated MdCKX7 expression in Tobacco leaves by transient injection. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b, and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (J-K) GUS staining and activity of apple calli co-expressing different combinations of recombinant plasmids including MdCKX7 pro ::GUS, 35S pro ::MdCDOF3 + MdCKX7 pro ::GUS, and 35S pro ::MdDOF3.6 + MdCKX7 pro ::GUS. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA.
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    MdCDOF3 and MdDOF3.6 bind to MdCKX7 promoter and activate its transcription. (A) Yeast one-hybridization (Y1H) assays showed that MdCDOF3 and MdDOF3.6 interacted with MdCKX7 promoter. The 2200 bp upstream MdCKX7 promoter sequence of ATG is used for detection. (B-C) The relative levels of MdCKX7 promoter fragment enriched by MdCDOF3 (B) and MdDOF3.6 (C) detected by chromatin immunoprecipitation (ChIP)-qPCR. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a and b) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (D–E) Electrophoretic shift assay (EMSA) determination of the interaction of MdCDOF3 (D) and MdDOF3.6 (E) with labeled DNA Probes in the MdCKX7 promoter. (F-I) Luciferase assays showed that MdCDOF3 (F and G) and MdDOF3.6 (H and I) activated MdCKX7 expression in Tobacco leaves by transient injection. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b, and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (J-K) GUS staining and activity of apple calli co-expressing different combinations of recombinant plasmids including MdCKX7 pro ::GUS, 35S pro ::MdCDOF3 + MdCKX7 pro ::GUS, and 35S pro ::MdDOF3.6 + MdCKX7 pro ::GUS. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA.

    Journal: Horticulture Research

    Article Title: Two DNA-binding One Zinc Finger transcription factors, MdCDOF3 and MdDOF3.6, accelerate leaf senescence by activating cytokinin oxidase MdCKX7 in response to sorbitol signaling in apple

    doi: 10.1093/hr/uhaf120

    Figure Lengend Snippet: MdCDOF3 and MdDOF3.6 bind to MdCKX7 promoter and activate its transcription. (A) Yeast one-hybridization (Y1H) assays showed that MdCDOF3 and MdDOF3.6 interacted with MdCKX7 promoter. The 2200 bp upstream MdCKX7 promoter sequence of ATG is used for detection. (B-C) The relative levels of MdCKX7 promoter fragment enriched by MdCDOF3 (B) and MdDOF3.6 (C) detected by chromatin immunoprecipitation (ChIP)-qPCR. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a and b) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (D–E) Electrophoretic shift assay (EMSA) determination of the interaction of MdCDOF3 (D) and MdDOF3.6 (E) with labeled DNA Probes in the MdCKX7 promoter. (F-I) Luciferase assays showed that MdCDOF3 (F and G) and MdDOF3.6 (H and I) activated MdCKX7 expression in Tobacco leaves by transient injection. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b, and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA. (J-K) GUS staining and activity of apple calli co-expressing different combinations of recombinant plasmids including MdCKX7 pro ::GUS, 35S pro ::MdCDOF3 + MdCKX7 pro ::GUS, and 35S pro ::MdDOF3.6 + MdCKX7 pro ::GUS. Data are expressed as the mean ± SEM of three biological replicates. Different letters (a, b and c) indicate significant differences ( P < 0.05) using Duncan’s multiple range test (MRT) after ANOVA.

    Article Snippet: Oligonucleotide probes for the MdCKX7 promoter were labeled using the EMSA Probe Biotin Labeling Kit (Beyotime, Shanghai, China) according to the manufacturer’s instructions.

    Techniques: Hybridization, Sequencing, Chromatin Immunoprecipitation, ChIP-qPCR, Shift Assay, Labeling, Luciferase, Expressing, Injection, Staining, Activity Assay, Recombinant